Programme / Uniwersytet Przyrodniczy we Wrocławiu

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BIOWorkshops

Course outline

Tuesday – 14^th September 2021

9.00 – 10.45	Introduction to R: operators, mathematical functions
10.45 – 11.00	Coffee break
11.00 – 12.45	Vectors, matrices, data frames and lists
12.45 – 13.00	Coffee break
13.00 – 14.00	Reading the data, introduction to programming

Wednesday – 15^th September 2021

9.00 – 10.45	Introduction to Bioconductor and RNA-seq data analysis: quality control, mapping, counting reads
10.45 – 11.00	Coffee break
11.00 – 12.45	Annotations packages: AnnotationDbi, biomaRt
12.45 – 13.00	Coffee break
13.00 – 14.00	Filtering and normalization of count dat

Thursday – 16^th September 2021

9.00 – 10.45	Differential expression analysis
10.45 – 11.00	Coffee break
11.00 – 12.45	GO and KEGG analysis
12.45 – 13.00	Coffee break
13.00 – 14.00	Case study

UPWr Base of Knowledge

Academic calendar

International Relations Office

UPWr Doctoral School